PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00980g00018.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 267aa    MW: 30020.8 Da    PI: 6.041
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00980g00018.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.52.4e-08131178455
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Peaxi162Scf00980g00018.1 131 SHSLAERARREKIGKKMKCLQDLVPGC----NKVIGKAGMLDEIINYVQSLQ 178
                               8*************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.05E-6125182No hitNo description
SuperFamilySSF474591.14E-15125190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.665127177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-16127190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.8E-6131178IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.6E-9133183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MLGRVQSSPD NHTDYNEEMS VLERQRAIFQ RLYESQQQIS SLSRQNIAQC NSLISEQIVN  60
CTQFQNFPFV EEGNCKTKNH EGEAAEVKSE IIMENDKVTS TNNLKENSTN SEVKKPDYIH  120
VRARRGQATD SHSLAERARR EKIGKKMKCL QDLVPGCNKV IGKAGMLDEI INYVQSLQKQ  180
VEFLSMKLAA SNNTDSNLFA TYMANFPTMA APSTLEIANI PAFLQNNLIQ QQQGSSIGRE  240
NCSMSFPEAF IDTSHVQVQE CQIGIAF
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754422e-53HG975442.1 Solanum pennellii chromosome ch03, complete genome.
GenBankHG9755152e-53HG975515.1 Solanum lycopersicum chromosome ch03, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016508620.13e-83PREDICTED: transcription factor BEE 3-like isoform X2
TrEMBLM1C2713e-86M1C271_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000581693e-85(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40002142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36540.18e-49BR enhanced expression 2